Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NSP_1920Histidinol-phosphatase [alternative form]; Nsp1920; ORF_ID:nsp1920. (268 aa)    
Predicted Functional Partners:
NSP_43030
Inositol-1-monophosphatase; Nsp43030; ORF_ID:nsp43030; Belongs to the inositol monophosphatase superfamily.
  
  
 
0.880
nusA
Transcription termination protein NusA; Participates in both transcription termination and antitermination.
   
   0.740
NSP_44620
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.734
NSP_1930
Protein pucC; Nsp1930; ORF_ID:nsp1930.
       0.711
nusG
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
   
 
 0.710
NSP_17890
DNA-directed RNA polymerase omega subunit; Nsp17890; ORF_ID:nsp17890.
   
   0.699
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.697
rpsJ
SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
 0.660
rpoC1
DNA-directed RNA polymerase gamma subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.652
rpoC2
DNA-directed RNA polymerase delta (beta'') subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
    
   0.652
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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