STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_19740Carbonic anhydrase; Nsp19740; ORF_ID:nsp19740. (176 aa)    
Predicted Functional Partners:
NSP_40340
Carboxysome protein CcmM; Nsp40340; ORF_ID:nsp40340.
  
 
 
 0.928
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.846
NSP_26210
Ribulose 1,5-bisphosphate carboxylase/oxygenase activase; Nsp26210; ORF_ID:nsp26210.
    
 
 0.699
NSP_26240
Ribulose bisphosphate carboxylase small chain; Nsp26240; ORF_ID:nsp26240.
    
 
 0.699
psbY
Photosystem II protein PsbY; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family.
       0.469
NSP_4490
UDP-N-acetylglucosamine 2-epimerase; Nsp4490; ORF_ID:nsp4490; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
  0.453
NSP_19730
Hypothetical protein; Nsp19730; ORF_ID:nsp19730.
       0.431
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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