STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_19770Sugar ABC transporter, periplasmic sugar-binding protein; Nsp19770; ORF_ID:nsp19770. (431 aa)    
Predicted Functional Partners:
NSP_42980
Sugar ABC transporter, permease protein; Nsp42980; ORF_ID:nsp42980.
 0.989
NSP_29560
ABC transporter sugar permease; Nsp29560; ORF_ID:nsp29560.
 
 0.987
NSP_15630
Sugar ABC transporter, permease protein; Nsp15630; ORF_ID:nsp15630.
 0.978
NSP_5090
Maltose/maltodextrin ABC transporter, permease protein MalG; Nsp5090; ORF_ID:nsp5090.
 
 0.976
NSP_7240
ABC transporter sugar permease; Nsp7240; ORF_ID:nsp7240.
 
 0.973
NSP_15010
Sugar ABC transporter, ATP-binding protein; Nsp15010; ORF_ID:nsp15010; Belongs to the ABC transporter superfamily.
 
 0.967
NSP_7940
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Nsp7940; ORF_ID:nsp7940; Belongs to the ABC transporter superfamily.
 
 0.946
NSP_19790
Cell division protein FtsA; Nsp19790; ORF_ID:nsp19790.
       0.567
NSP_19800
Hypothetical protein; Nsp19800; ORF_ID:nsp19800.
       0.563
NSP_19810
Tfp pilus assembly protein PilO; Nsp19810; ORF_ID:nsp19810.
       0.562
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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