STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20030Hypothetical protein; Nsp20030; ORF_ID:nsp20030. (402 aa)    
Predicted Functional Partners:
NSP_26210
Ribulose 1,5-bisphosphate carboxylase/oxygenase activase; Nsp26210; ORF_ID:nsp26210.
    
 0.930
NSP_43130
Mov34/MPN/PAD-1; Nsp43130; ORF_ID:nsp43130.
    
  0.761
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
  
 0.745
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.696
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 
 0.489
NSP_36760
Hypothetical protein; Nsp36760; ORF_ID:nsp36760.
    
 
 0.488
NSP_34990
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.482
NSP_51920
Two-component hybrid sensor and regulator; Nsp51920; ORF_ID:nsp51920.
 
  
 0.481
NSP_14190
Glutathione S-transferase, putative; Nsp14190; ORF_ID:nsp14190.
  
     0.480
NSP_46100
Hypothetical protein; Nsp46100; ORF_ID:nsp46100.
   
 
  0.476
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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