STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20100Bifunctional protein: zinc-containing alcohol dehydrogenase; Nsp20100; ORF_ID:nsp20100. (335 aa)    
Predicted Functional Partners:
NSP_26940
Malonyl CoA-acyl carrier protein transacylase; Nsp26940; ORF_ID:nsp26940.
 
 0.989
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
 
 0.984
NSP_27060
Malonyl CoA-acyl carrier protein transacylase; Nsp27060; ORF_ID:nsp27060.
 
 
 0.968
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
 
 0.957
NSP_29240
Malonyl CoA-acyl carrier protein transacylase; Nsp29240; ORF_ID:nsp29240.
 
   
 0.936
NSP_42130
Hypothetical protein; Nsp42130; ORF_ID:nsp42130; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.934
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
 
 0.928
NSP_21280
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 
 0.926
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
0.924
NSP_46290
Polyketide synthase; Nsp46290; ORF_ID:nsp46290.
 
   
 0.921
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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