STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20270Putative cytoplasmic protein; Nsp20270; ORF_ID:nsp20270. (275 aa)    
Predicted Functional Partners:
NSP_20280
VapC toxin protein; Nsp20280; ORF_ID:nsp20280.
       0.628
NSP_20290
Hypothetical protein; Nsp20290; ORF_ID:nsp20290.
       0.628
NSP_33870
Hypothetical protein; Nsp33870; ORF_ID:nsp33870.
  
     0.621
NSP_52020
Hypothetical protein; Nsp52020; ORF_ID:nsp52020.
  
     0.619
NSP_15510
Hypothetical protein; Nsp15510; ORF_ID:nsp15510.
  
     0.617
NSP_15520
Hypothetical protein; Nsp15520; ORF_ID:nsp15520.
  
     0.607
NSP_20300
Type I restriction-modification system, specificity subunit S; Nsp20300; ORF_ID:nsp20300.
       0.544
NSP_28230
Hypothetical protein; Nsp28230; ORF_ID:nsp28230.
  
     0.541
NSP_39040
Hypothetical protein; Nsp39040; ORF_ID:nsp39040.
  
     0.489
NSP_12190
Hypothetical protein; Nsp12190; ORF_ID:nsp12190.
  
     0.486
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.