STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20390Type IV fimbrial assembly, ATPase PilB; Nsp20390; ORF_ID:nsp20390. (635 aa)    
Predicted Functional Partners:
NSP_20410
Type IV fimbrial assembly protein PilC; Nsp20410; ORF_ID:nsp20410.
 
 0.998
NSP_19790
Cell division protein FtsA; Nsp19790; ORF_ID:nsp19790.
 
 
 
 0.962
NSP_18580
Type IV pilin PilA; Nsp18580; ORF_ID:nsp18580.
 
 0.945
NSP_19800
Hypothetical protein; Nsp19800; ORF_ID:nsp19800.
  
 
 0.932
NSP_43270
Leader peptidase (Prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.919
NSP_19820
Type II secretion outermembrane pore forming protein (PulD); Nsp19820; ORF_ID:nsp19820; Belongs to the bacterial secretin family.
 
 
 
 0.907
NSP_19810
Tfp pilus assembly protein PilO; Nsp19810; ORF_ID:nsp19810.
  
 
 0.863
NSP_2890
Hypothetical protein; Nsp2890; ORF_ID:nsp2890.
  
 0.826
NSP_43140
S23 ribosomal protein; Nsp43140; ORF_ID:nsp43140.
  
 0.826
NSP_8620
Nsp8620; ORF_ID:nsp8620.
  
 0.826
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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