STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20890Hypothetical protein; Nsp20890; ORF_ID:nsp20890. (221 aa)    
Predicted Functional Partners:
NSP_20900
Cobalt-zinc-cadmium resistance protein CzcA; Nsp20900; ORF_ID:nsp20900; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.977
NSP_26050
Cobalt-zinc-cadmium resistance protein CzcA; Nsp26050; ORF_ID:nsp26050; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.875
NSP_9440
Cobalt-zinc-cadmium resistance protein CzcA; Nsp9440; ORF_ID:nsp9440; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.843
NSP_45080
Outer membrane protein; Nsp45080; ORF_ID:nsp45080.
  
 0.818
NSP_48850
Outer membrane protein; Nsp48850; ORF_ID:nsp48850.
  
 0.818
NSP_49640
AcrB/AcrD/AcrF family protein; Nsp49640; ORF_ID:nsp49640; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.817
NSP_51530
Multidrug efflux transporter MexF; Nsp51530; ORF_ID:nsp51530; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.817
NSP_20810
Sensory transduction histidine kinase; Nsp20810; ORF_ID:nsp20810.
 
     0.806
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
   
   0.737
NSP_48060
Putative prophage protein (ps3); Nsp48060; ORF_ID:nsp48060.
  
     0.695
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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