STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_20920Cysteine desulfurase; Nsp20920; ORF_ID:nsp20920. (396 aa)    
Predicted Functional Partners:
NSP_40690
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 0.991
NSP_3570
Sulfur acceptor protein SufE for iron-sulfur cluster assembly; Nsp3570; ORF_ID:nsp3570.
  
 0.920
NSP_170
Iron-sulfur cluster assembly ATPase protein SufC; Nsp170; ORF_ID:nsp170.
  
 0.900
NSP_180
Iron-sulfur cluster assembly protein SufB; Nsp180; ORF_ID:nsp180.
 
 0.838
NSP_160
Iron-sulfur cluster assembly protein SufD; Nsp160; ORF_ID:nsp160.
 
 0.837
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.799
NSP_18630
Thioredoxin reductase; Nsp18630; ORF_ID:nsp18630.
  
 
  0.753
NSP_50560
Bacilysin biosynthesis protein bacB; Nsp50560; ORF_ID:nsp50560.
    
  0.723
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.717
NSP_31340
Hypothetical protein; Nsp31340; ORF_ID:nsp31340.
  
  
  0.574
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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