STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_2110Transposase, IS605 OrfB; Nsp2110; ORF_ID:nsp2110. (366 aa)    
Predicted Functional Partners:
NSP_2100
Hypothetical protein; Nsp2100; ORF_ID:nsp2100.
       0.773
NSP_20640
Transposase; Nsp20640; ORF_ID:nsp20640.
  
     0.606
NSP_28990
Transposase; Nsp28990; ORF_ID:nsp28990.
  
     0.606
NSP_2090
Na+/solute symporter; Nsp2090; ORF_ID:nsp2090; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.554
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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