STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_22110Alkyl hydroperoxide reductase subunit C-like protein; Nsp22110; ORF_ID:nsp22110. (185 aa)    
Predicted Functional Partners:
NSP_11580
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.744
NSP_22120
Hypothetical protein; Nsp22120; ORF_ID:nsp22120.
       0.671
NSP_49120
Thioredoxin; Nsp49120; ORF_ID:nsp49120; Belongs to the thioredoxin family.
    
   0.642
NSP_29010
Thioredoxin; Nsp29010; ORF_ID:nsp29010; Belongs to the thioredoxin family.
    
   0.485
NSP_38880
Thioredoxin; Nsp38880; ORF_ID:nsp38880; Belongs to the thioredoxin family.
    
   0.485
NSP_22130
Hypothetical protein; Nsp22130; ORF_ID:nsp22130.
       0.409
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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