STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_22660Transposase, IS605 OrfB; Nsp22660; ORF_ID:nsp22660. (135 aa)    
Predicted Functional Partners:
NSP_31280
Transposase, IS605 OrfB; Nsp31280; ORF_ID:nsp31280.
 
     0.971
NSP_21260
Putative transposase; Nsp21260; ORF_ID:nsp21260.
  
     0.774
NSP_32650
Transposase; Nsp32650; ORF_ID:nsp32650.
  
     0.774
NSP_5190
Transposase; Nsp5190; ORF_ID:nsp5190.
  
     0.771
NSP_14220
Transposase, IS605 OrfB; Nsp14220; ORF_ID:nsp14220.
  
     0.768
NSP_2590
Transposase; Nsp2590; ORF_ID:nsp2590.
  
     0.766
NSP_45340
Transposase, IS605 OrfB; Nsp45340; ORF_ID:nsp45340.
  
     0.764
NSP_20640
Transposase; Nsp20640; ORF_ID:nsp20640.
  
     0.753
NSP_28990
Transposase; Nsp28990; ORF_ID:nsp28990.
  
     0.753
NSP_22670
SNF2 helicase; Nsp22670; ORF_ID:nsp22670.
       0.523
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.