STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23010Hypothetical protein; Nsp23010; ORF_ID:nsp23010. (465 aa)    
Predicted Functional Partners:
NSP_22990
3-dehydroquinate synthase; Nsp22990; ORF_ID:nsp22990.
   
 0.985
NSP_23020
D-alanine--D-alanine ligase; Nsp23020; ORF_ID:nsp23020.
     0.878
NSP_23000
Caffeoyl-CoA O-methyltransferase; Nsp23000; ORF_ID:nsp23000.
 
   
 0.808
carB
Carbamoyl-phosphate synthase large chain; Nsp9830; ORF_ID:nsp9830; Belongs to the CarB family.
     
 0.631
NSP_5540
Hypothetical protein; Nsp5540; ORF_ID:nsp5540.
  
     0.490
NSP_20790
Hypothetical protein; Nsp20790; ORF_ID:nsp20790.
  
     0.458
NSP_7990
Hypothetical protein; Nsp7990; ORF_ID:nsp7990.
  
     0.455
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.