STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23100Methyltransferase domain protein; Nsp23100; ORF_ID:nsp23100. (217 aa)    
Predicted Functional Partners:
NSP_25820
Protoporphyrin IX Mg-chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.879
NSP_3090
Protein serine-threonine phosphatase; Nsp3090; ORF_ID:nsp3090.
  
 
   0.745
NSP_23090
Glycosyltransferase; Nsp23090; ORF_ID:nsp23090.
 
     0.723
NSP_17850
Hypothetical protein; Nsp17850; ORF_ID:nsp17850.
    
   0.712
NSP_23110
Hypothetical protein; Nsp23110; ORF_ID:nsp23110.
    
  0.604
NSP_51570
2-octaprenyl-6-methoxyphenol hydroxylase; Nsp51570; ORF_ID:nsp51570.
    
  0.588
NSP_32100
3-demethylubiquinone-9 3-methyltransferase; Nsp32100; ORF_ID:nsp32100.
  
  
 
0.540
NSP_52220
SAM-dependent methyltransferase; Nsp52220; ORF_ID:nsp52220.
  
 
  0.529
NSP_23060
Hypothetical protein; Nsp23060; ORF_ID:nsp23060.
       0.493
NSP_23070
Acetyltransferase (isoleucine patch superfamily); Nsp23070; ORF_ID:nsp23070.
       0.493
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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