STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23150Hypothetical protein; Nsp23150; ORF_ID:nsp23150. (395 aa)    
Predicted Functional Partners:
NSP_23130
Putative hexosyltransferase; Nsp23130; ORF_ID:nsp23130.
 
    
0.834
NSP_23140
Hypothetical protein; Nsp23140; ORF_ID:nsp23140.
       0.773
NSP_50590
Hypothetical protein; Nsp50590; ORF_ID:nsp50590.
  
     0.743
NSP_23110
Hypothetical protein; Nsp23110; ORF_ID:nsp23110.
 
     0.742
NSP_53280
Glycosyltransferase; Nsp53280; ORF_ID:nsp53280.
  
     0.704
NSP_30540
Glycosyl transferase; Nsp30540; ORF_ID:nsp30540.
  
     0.697
NSP_23210
Hypothetical protein; Nsp23210; ORF_ID:nsp23210.
 
     0.695
NSP_14830
Glycosyltransferase; Nsp14830; ORF_ID:nsp14830.
 
     0.683
NSP_50180
Glycosyl transferase, group 1; Nsp50180; ORF_ID:nsp50180.
  
     0.663
NSP_32420
Glycosyltransferase; Nsp32420; ORF_ID:nsp32420.
  
     0.627
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.