STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23230Hypothetical protein; Nsp23230; ORF_ID:nsp23230. (69 aa)    
Predicted Functional Partners:
NSP_23190
Transferase, hexapeptide repeat family; Nsp23190; ORF_ID:nsp23190.
       0.442
NSP_23240
Hypothetical protein; Nsp23240; ORF_ID:nsp23240.
       0.426
NSP_23250
Hypothetical protein; Nsp23250; ORF_ID:nsp23250.
       0.426
NSP_23260
Putative CDP-tyvelose epimerase; Nsp23260; ORF_ID:nsp23260.
       0.426
NSP_23180
Hypothetical protein; Nsp23180; ORF_ID:nsp23180.
       0.419
NSP_23200
Putative fucosyl transferase; Nsp23200; ORF_ID:nsp23200.
       0.419
NSP_23210
Hypothetical protein; Nsp23210; ORF_ID:nsp23210.
       0.419
NSP_23220
Hypothetical protein; Nsp23220; ORF_ID:nsp23220.
       0.419
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.