STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23340Hypothetical protein; Nsp23340; ORF_ID:nsp23340. (157 aa)    
Predicted Functional Partners:
NSP_15730
Pentapeptide repeat; Nsp15730; ORF_ID:nsp15730.
  
 
  0.945
NSP_14990
WD-40 repeat protein; Nsp14990; ORF_ID:nsp14990.
  
 
  0.943
NSP_27030
Ankyrin-like protein; Nsp27030; ORF_ID:nsp27030.
    
  0.929
NSP_36860
Ankyrin; Nsp36860; ORF_ID:nsp36860.
    
  0.929
NSP_40940
Ankyrin repeat protein; Nsp40940; ORF_ID:nsp40940.
    
  0.929
NSP_36790
Cleavage and polyadenylation specificity factor, 73 kDa subunit; Nsp36790; ORF_ID:nsp36790.
   
  0.877
NSP_51420
FKBP-type peptidyl-prolyl cis-trans isomerase; Nsp51420; ORF_ID:nsp51420.
    
 0.869
rplC
LSU ribosomal protein L3p (L3e); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
    
  0.777
NSP_35040
Hypothetical protein; Nsp35040; ORF_ID:nsp35040.
    
 0.755
NSP_46790
Serine/threonine kinase; Nsp46790; ORF_ID:nsp46790.
    
 0.755
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.