STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23700Transposase; Nsp23700; ORF_ID:nsp23700. (53 aa)    
Predicted Functional Partners:
NSP_51900
Hypothetical protein; Nsp51900; ORF_ID:nsp51900.
 
     0.815
NSP_33980
CRISPR-associated RAMP, Csx10 family; Nsp33980; ORF_ID:nsp33980.
  
     0.596
NSP_38340
Hypothetical protein; Nsp38340; ORF_ID:nsp38340.
  
     0.562
NSP_33930
DUF324 domain-containing protein; Nsp33930; ORF_ID:nsp33930.
  
     0.546
NSP_34000
CRISPR-associated RAMP Cmr2; Nsp34000; ORF_ID:nsp34000.
  
     0.528
NSP_33990
DUF324 domain-containing protein; Nsp33990; ORF_ID:nsp33990.
  
     0.514
NSP_33950
CRISPR-associated RAMP, TM1809 family; Nsp33950; ORF_ID:nsp33950.
  
     0.511
NSP_27390
Hypothetical protein; Nsp27390; ORF_ID:nsp27390.
  
     0.503
NSP_33910
Hypothetical protein; Nsp33910; ORF_ID:nsp33910.
  
     0.490
NSP_19310
Transposase; Nsp19310; ORF_ID:nsp19310.
  
     0.470
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.