STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23720Substrate-binding protein of ABC transporter; Nsp23720; ORF_ID:nsp23720. (308 aa)    
Predicted Functional Partners:
NSP_27490
Ferric hydroxamate ABC transporter, ATP-binding protein FhuC; Nsp27490; ORF_ID:nsp27490.
 
 0.947
NSP_11960
ABC-type Fe3+-siderophore transport system, ATPase component; Nsp11960; ORF_ID:nsp11960.
 
 0.945
NSP_27510
Ferric hydroxamate ABC transporter, permease component FhuB; Nsp27510; ORF_ID:nsp27510; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.923
NSP_11950
ABC-type Fe3+-siderophore transport system, permease 2 component; Nsp11950; ORF_ID:nsp11950; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.922
NSP_11940
ABC-type Fe3+-siderophore transport system, permease component; Nsp11940; ORF_ID:nsp11940; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.921
cbiA
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.894
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
      0.615
NSP_51010
High-affinity Fe2+/Pb2+ permease; Nsp51010; ORF_ID:nsp51010.
   
  
 0.519
NSP_23710
Hypothetical protein; Nsp23710; ORF_ID:nsp23710.
       0.492
NSP_11650
Putative heme iron utilization protein; Nsp11650; ORF_ID:nsp11650.
  
    0.453
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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