STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_23810DedA family protein, putative; Nsp23810; ORF_ID:nsp23810. (282 aa)    
Predicted Functional Partners:
NSP_23790
Mercuric ion reductase; Nsp23790; ORF_ID:nsp23790.
     0.970
NSP_8660
Glycosyltransferase; Nsp8660; ORF_ID:nsp8660.
 
     0.728
NSP_8830
Hypothetical protein; Nsp8830; ORF_ID:nsp8830.
  
     0.718
NSP_23800
Hypothetical protein; Nsp23800; ORF_ID:nsp23800.
 
     0.690
NSP_23830
Fe-S oxidoreductases of moaA/nifB/pqqE family; Nsp23830; ORF_ID:nsp23830.
 
   
 0.631
NSP_19860
Mercuric ion reductase; Nsp19860; ORF_ID:nsp19860.
     0.600
NSP_23050
Hypothetical protein; Nsp23050; ORF_ID:nsp23050.
 
     0.596
NSP_33320
Hypothetical protein; Nsp33320; ORF_ID:nsp33320.
 
     0.577
NSP_4540
Transcription regulator [contains diacylglycerol kinase catalytic domain]; Nsp4540; ORF_ID:nsp4540.
    
  0.528
NSP_37350
Hypothetical protein; Nsp37350; ORF_ID:nsp37350.
    
  0.521
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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