STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_24490Phytoene synthase; Nsp24490; ORF_ID:nsp24490. (271 aa)    
Predicted Functional Partners:
NSP_24500
Phytoene desaturase, pro-zeta-carotene producing; Nsp24500; ORF_ID:nsp24500.
  
 0.986
NSP_2180
Hypothetical protein; Nsp2180; ORF_ID:nsp2180.
    
 0.972
NSP_6930
Hypothetical protein; Nsp6930; ORF_ID:nsp6930.
    
 0.972
NSP_11470
Phytoene dehydrogenase; Nsp11470; ORF_ID:nsp11470.
 
 0.957
NSP_46540
Oxidoreductase, short chain dehydrogenase/reductase family; Nsp46540; ORF_ID:nsp46540.
  
 0.949
NSP_9130
Neurosporene desaturase; Nsp9130; ORF_ID:nsp9130.
 
 
 0.942
NSP_37110
Carotenoid cis-trans isomerase; Nsp37110; ORF_ID:nsp37110.
 
 
 0.924
NSP_26730
Long-chain-fatty-acid--CoA ligase; Nsp26730; ORF_ID:nsp26730.
    
 0.919
ndhJ
NAD(P)H-quinone oxidoreductase chain J; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
   
 0.916
NSP_25760
Hypothetical protein; Nsp25760; ORF_ID:nsp25760.
     
 0.902
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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