STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_24900Phycocyanin alpha chain; Nsp24900; ORF_ID:nsp24900. (163 aa)    
Predicted Functional Partners:
NSP_24920
Phycobilisome rod linker polypeptide, phycocyanin-associated; Nsp24920; ORF_ID:nsp24920; Belongs to the phycobilisome linker protein family.
 
 
 0.997
NSP_24930
Phycobilisome small rod capping linker polypeptide, phycocyanin-associated; Nsp24930; ORF_ID:nsp24930.
 
 
 0.996
NSP_24980
Phycobilisome rod-core linker polypeptide, phycocyanin-associated; Nsp24980; ORF_ID:nsp24980; Belongs to the phycobilisome linker protein family.
 
 
 0.995
NSP_24890
Phycocyanin beta chain; Nsp24890; ORF_ID:nsp24890.
 
 
0.994
NSP_24970
Phycobilisome rod-core linker polypeptide, phycocyanin-associated; Nsp24970; ORF_ID:nsp24970; Belongs to the phycobilisome linker protein family.
 
 
 0.994
NSP_24060
Phycobilisome core-membrane linker polypeptide; Nsp24060; ORF_ID:nsp24060; Belongs to the phycobilisome linker protein family.
  
 
 0.992
NSP_24960
Phycobilisome rod-core linker polypeptide, phycocyanin-associated; Nsp24960; ORF_ID:nsp24960; Belongs to the phycobilisome linker protein family.
 
 
 0.990
NSP_24020
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.985
NSP_24040
Allophycocyanin alpha chain; Nsp24040; ORF_ID:nsp24040.
  
 
 
0.964
NSP_24940
Phycocyanobilin lyase alpha subunit; Nsp24940; ORF_ID:nsp24940.
 
  
 0.959
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.