STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_24960Phycobilisome rod-core linker polypeptide, phycocyanin-associated; Nsp24960; ORF_ID:nsp24960; Belongs to the phycobilisome linker protein family. (279 aa)    
Predicted Functional Partners:
NSP_24890
Phycocyanin beta chain; Nsp24890; ORF_ID:nsp24890.
 
 
 0.990
NSP_24900
Phycocyanin alpha chain; Nsp24900; ORF_ID:nsp24900.
 
 
 0.990
NSP_24930
Phycobilisome small rod capping linker polypeptide, phycocyanin-associated; Nsp24930; ORF_ID:nsp24930.
 
 
 0.990
NSP_24920
Phycobilisome rod linker polypeptide, phycocyanin-associated; Nsp24920; ORF_ID:nsp24920; Belongs to the phycobilisome linker protein family.
 
 
 
0.967
NSP_24020
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.965
NSP_24950
Phycocyanobilin lyase beta subunit; Nsp24950; ORF_ID:nsp24950.
 
  
 0.957
NSP_24030
Allophycocyanin beta chain; Nsp24030; ORF_ID:nsp24030.
  
 
 
 0.955
NSP_24040
Allophycocyanin alpha chain; Nsp24040; ORF_ID:nsp24040.
  
 
 
 0.954
NSP_16170
Phycobilisome core component; Nsp16170; ORF_ID:nsp16170.
  
 
 
 0.951
NSP_52170
Allophycocyanin-B; Nsp52170; ORF_ID:nsp52170.
  
 
 
 0.951
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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