STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_25020Hypothetical protein; Nsp25020; ORF_ID:nsp25020. (213 aa)    
Predicted Functional Partners:
NSP_40330
Carboxysome protein CcmL; Nsp40330; ORF_ID:nsp40330.
 
 
 
 0.886
NSP_40310
Putative carbon dioxide concentrating mechanism protein CcmK; Nsp40310; ORF_ID:nsp40310.
 
 
 
 0.885
NSP_40320
Putative carbon dioxide concentrating mechanism protein CcmK; Nsp40320; ORF_ID:nsp40320.
 
 
   0.877
NSP_40370
Carbon dioxide concentrating mechanism protein CcmO; Nsp40370; ORF_ID:nsp40370.
 
 
   0.869
NSP_50290
Carbon dioxide concentrating mechanism protein CcmK-like protein; Nsp50290; ORF_ID:nsp50290.
 
 
 
 0.866
NSP_50280
Microcompartments protein precursor; Nsp50280; ORF_ID:nsp50280.
 
 
 
 0.803
NSP_25010
Pentapeptide repeat family protein; Nsp25010; ORF_ID:nsp25010.
       0.784
NSP_24990
Hypothetical protein; Nsp24990; ORF_ID:nsp24990.
       0.673
NSP_25000
Methyltransferase; Nsp25000; ORF_ID:nsp25000.
       0.673
NSP_4980
Carbohydrate kinase, FGGY family; Nsp4980; ORF_ID:nsp4980.
  
     0.583
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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