STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_25030Monooxygenase, flavin-binding family; Nsp25030; ORF_ID:nsp25030. (476 aa)    
Predicted Functional Partners:
NSP_25040
3-oxoacyl-[acyl-carrier protein] reductase; Nsp25040; ORF_ID:nsp25040; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.892
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.835
atpA-2
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.835
rplQ
LSU ribosomal protein L17p; Nsp43580; ORF_ID:nsp43580.
   
   0.804
NSP_5820
Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
    
 
 0.801
rpmJ
LSU ribosomal protein L36p; Nsp43620; ORF_ID:nsp43620; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.788
rpmA
LSU ribosomal protein L27p; Nsp16350; ORF_ID:nsp16350; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.787
NSP_17310
Hypothetical protein; Nsp17310; ORF_ID:nsp17310.
   
   0.787
rpsI
SSU ribosomal protein S9p (S16e); Nsp43550; ORF_ID:nsp43550; Belongs to the universal ribosomal protein uS9 family.
    
   0.787
rpmF
LSU ribosomal protein L32p; Nsp48610; ORF_ID:nsp48610; Belongs to the bacterial ribosomal protein bL32 family.
    
   0.787
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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