STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_2530SWF/SNF family helicase; Nsp2530; ORF_ID:nsp2530. (278 aa)    
Predicted Functional Partners:
NSP_2510
Helicase, SNF2/RAD54 family; Nsp2510; ORF_ID:nsp2510.
    0.984
NSP_22650
Superfamily II DNA/RNA helicase, SNF2 family; Nsp22650; ORF_ID:nsp22650.
    0.799
NSP_2600
Hypothetical protein; Nsp2600; ORF_ID:nsp2600.
  
     0.538
NSP_1120
Hypothetical protein; Nsp1120; ORF_ID:nsp1120.
  
     0.518
NSP_2520
Putative cytoplasmic protein; Nsp2520; ORF_ID:nsp2520.
       0.439
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.422
NSP_38610
Hypothetical protein; Nsp38610; ORF_ID:nsp38610.
  
     0.404
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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