STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (214 aa)    
Predicted Functional Partners:
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
  
  
 0.859
pyrB
Aspartate carbamoyltransferase; Nsp27810; ORF_ID:nsp27810; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
      0.771
nnrD
YjeF protein, function unknown; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...]
    
 0.726
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 
  0.698
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
    
  0.688
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
   
 
  0.673
NSP_22040
Phosphomethylpyrimidine kinase; Nsp22040; ORF_ID:nsp22040.
     
 0.662
NSP_2590
Transposase; Nsp2590; ORF_ID:nsp2590.
       0.636
carB
Carbamoyl-phosphate synthase large chain; Nsp9830; ORF_ID:nsp9830; Belongs to the CarB family.
 
 
  
 0.631
carA
Carbamoyl-phosphate synthase small chain; Nsp39230; ORF_ID:nsp39230; Belongs to the CarA family.
 
      0.622
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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