STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_263302-dehydropantoate 2-reductase; Nsp26330; ORF_ID:nsp26330. (326 aa)    
Predicted Functional Partners:
panC/cmk
Pantoate--beta-alanine ligase / Cytidylate kinase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
    
 0.915
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
    
 0.880
NSP_26320
Long-chain-fatty-acid--CoA ligase; Nsp26320; ORF_ID:nsp26320.
 
     0.831
NSP_7010
Alkaline phosphatase; Nsp7010; ORF_ID:nsp7010.
    
  0.748
NSP_9770
ADP-ribose pyrophosphatase; Nsp9770; ORF_ID:nsp9770; Belongs to the Nudix hydrolase family.
 
   
  0.699
NSP_46080
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Nsp46080; ORF_ID:nsp46080.
    
 0.558
NSP_26310
Membrane GTPase LepA; Nsp26310; ORF_ID:nsp26310.
       0.472
NSP_48090
Cobalamin biosynthesis protein CobG; Nsp48090; ORF_ID:nsp48090; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
  0.445
NSP_26340
D-3-phosphoglycerate dehydrogenase; Nsp26340; ORF_ID:nsp26340; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.442
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
  
 0.417
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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