STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_26460Hypothetical protein; Nsp26460; ORF_ID:nsp26460. (1198 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.744
NSP_37850
Hypothetical protein; Nsp37850; ORF_ID:nsp37850.
  
     0.703
NSP_22770
DNA primase; Nsp22770; ORF_ID:nsp22770.
  
     0.700
NSP_45270
Hypothetical protein; Nsp45270; ORF_ID:nsp45270.
  
     0.696
NSP_16150
Hypothetical protein; Nsp16150; ORF_ID:nsp16150.
 
  
  0.673
NSP_34870
Hypothetical protein; Nsp34870; ORF_ID:nsp34870.
  
     0.635
NSP_20290
Hypothetical protein; Nsp20290; ORF_ID:nsp20290.
  
     0.577
NSP_34880
Hypothetical protein; Nsp34880; ORF_ID:nsp34880.
  
     0.565
NSP_47680
Two-component hybrid sensor and regulator; Nsp47680; ORF_ID:nsp47680.
     
 0.561
NSP_14400
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Nsp14400; ORF_ID:nsp14400.
  
     0.555
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.