STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_27760Muconate cycloisomerase; Nsp27760; ORF_ID:nsp27760. (350 aa)    
Predicted Functional Partners:
NSP_27770
EBNA-1 nuclear protein; Nsp27770; ORF_ID:nsp27770.
     0.977
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
  
 
 0.776
NSP_48220
O-succinylbenzoic acid--CoA ligase; Nsp48220; ORF_ID:nsp48220.
  
 
  0.643
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.620
NSP_49250
Long-chain-fatty-acid--CoA ligase; Nsp49250; ORF_ID:nsp49250.
  
 
  0.595
NSP_47070
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site; Nsp47070; ORF_ID:nsp47070.
 
  
  0.594
NSP_27750
ADP-ribose pyrophosphatase-like protein; Nsp27750; ORF_ID:nsp27750.
       0.560
NSP_4980
Carbohydrate kinase, FGGY family; Nsp4980; ORF_ID:nsp4980.
     
 0.533
NSP_53400
Gluconokinase; Nsp53400; ORF_ID:nsp53400.
    
  0.531
NSP_25080
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase; Nsp25080; ORF_ID:nsp25080; Belongs to the aldehyde dehydrogenase family.
    
 0.523
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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