STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_27910Hypothetical protein; Nsp27910; ORF_ID:nsp27910. (70 aa)    
Predicted Functional Partners:
NSP_27920
Hypothetical protein; Nsp27920; ORF_ID:nsp27920.
   
   0.869
NSP_37750
UPF0150 protein; Nsp37750; ORF_ID:nsp37750.
 
 
 
 0.766
NSP_6720
Hypothetical protein; Nsp6720; ORF_ID:nsp6720.
  
 
   0.642
NSP_2860
Hypothetical protein; Nsp2860; ORF_ID:nsp2860.
  
     0.602
NSP_17810
Hypothetical protein; Nsp17810; ORF_ID:nsp17810.
  
 
   0.573
NSP_10260
Hypothetical protein; Nsp10260; ORF_ID:nsp10260.
  
 
   0.569
NSP_27930
Type II secretory pathway, pseudopilin PulG; Nsp27930; ORF_ID:nsp27930.
       0.542
NSP_17750
Protein of unknown function UPF0150; Nsp17750; ORF_ID:nsp17750.
  
 
   0.541
NSP_500
Hypothetical protein; Nsp500; ORF_ID:nsp500.
  
 
   0.531
NSP_40620
Hypothetical protein; Nsp40620; ORF_ID:nsp40620.
  
 
   0.512
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.