STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_285002'-5' RNA ligase; Nsp28500; ORF_ID:nsp28500. (195 aa)    
Predicted Functional Partners:
NSP_28510
Hypothetical protein; Nsp28510; ORF_ID:nsp28510.
 
     0.631
NSP_42760
Hypothetical protein; Nsp42760; ORF_ID:nsp42760.
  
     0.542
NSP_28530
Methyl-accepting chemotaxis protein; Nsp28530; ORF_ID:nsp28530.
 
     0.524
NSP_14790
Bacterial cell division membrane protein; Nsp14790; ORF_ID:nsp14790.
  
     0.499
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
  
 0.477
NSP_17900
Hypothetical protein; Nsp17900; ORF_ID:nsp17900.
  
     0.458
NSP_12650
Competence/damage-inducible protein CinA; Nsp12650; ORF_ID:nsp12650; Belongs to the CinA family.
     
 0.451
NSP_44510
Adenosine deaminase; Nsp44510; ORF_ID:nsp44510.
  
     0.439
NSP_38340
Hypothetical protein; Nsp38340; ORF_ID:nsp38340.
  
     0.430
NSP_15140
Hypothetical protein; Nsp15140; ORF_ID:nsp15140.
  
     0.410
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.