STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_29060Homoserine dehydrogenase; Nsp29060; ORF_ID:nsp29060. (337 aa)    
Predicted Functional Partners:
NSP_21860
Hypothetical protein; Nsp21860; ORF_ID:nsp21860.
 
 
 0.994
NSP_21850
ATP-binding protein of ABC transporter; Nsp21850; ORF_ID:nsp21850.
  
 
 0.989
NSP_21840
Putative permease; Nsp21840; ORF_ID:nsp21840.
  
 
 0.936
NSP_30480
Hypothetical protein; Nsp30480; ORF_ID:nsp30480.
  
 
 0.936
NSP_50630
Hypothetical protein; Nsp50630; ORF_ID:nsp50630.
 
  
 0.847
NSP_46450
TPR repeat; Nsp46450; ORF_ID:nsp46450.
  
   
 0.795
NSP_9180
Chromosome segregation ATPase; Nsp9180; ORF_ID:nsp9180.
  
     0.772
NSP_52270
WD40 repeat protein; Nsp52270; ORF_ID:nsp52270.
  
     0.770
NSP_16990
Serine/threonine protein kinase; Nsp16990; ORF_ID:nsp16990.
  
     0.768
NSP_52260
Hypothetical protein; Nsp52260; ORF_ID:nsp52260.
  
     0.768
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.