STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_3000VCBS repeat domain protein; Nsp3000; ORF_ID:nsp3000. (612 aa)    
Predicted Functional Partners:
NSP_14950
Nsp14950; ORF_ID:nsp14950.
   
 
  0.792
NSP_52410
Anthranilate synthase, aminase component / Anthranilate synthase, amidotransferase component; Nsp52410; ORF_ID:nsp52410.
   
 
  0.792
NSP_7010
Alkaline phosphatase; Nsp7010; ORF_ID:nsp7010.
  
 
  0.792
NSP_3010
Hypothetical protein; Nsp3010; ORF_ID:nsp3010.
       0.773
NSP_45080
Outer membrane protein; Nsp45080; ORF_ID:nsp45080.
    
   0.685
NSP_48850
Outer membrane protein; Nsp48850; ORF_ID:nsp48850.
    
   0.685
NSP_27190
Chitinase; Nsp27190; ORF_ID:nsp27190; Belongs to the glycosyl hydrolase 18 family.
    
 0.576
NSP_26150
Inosine-uridine preferring nucleoside hydrolase; Nsp26150; ORF_ID:nsp26150.
    
  0.552
NSP_18110
Calcium-dependent protease precursor; Nsp18110; ORF_ID:nsp18110.
     
 0.532
NSP_29000
Inosine-5'-monophosphate dehydrogenase; Nsp29000; ORF_ID:nsp29000.
    
  0.514
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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