STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_30190AAA family ATPase; Nsp30190; ORF_ID:nsp30190. (244 aa)    
Predicted Functional Partners:
NSP_30200
Hypothetical protein; Nsp30200; ORF_ID:nsp30200.
     0.941
NSP_30700
Cell division protein FtsH; Nsp30700; ORF_ID:nsp30700.
 
 
   0.872
NSP_23610
Hypothetical protein; Nsp23610; ORF_ID:nsp23610.
   
 0.850
NSP_30710
Cell division protein FtsH; Nsp30710; ORF_ID:nsp30710; Belongs to the AAA ATPase family.
 
 
  
0.818
NSP_20
DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 0.800
NSP_38780
Hypothetical protein DUF 1768; Nsp38780; ORF_ID:nsp38780.
    
 
 0.797
NSP_3970
Chaperone protein HtpG; Nsp3970; ORF_ID:nsp3970.
    
 0.792
NSP_18930
DNA polymerase III delta prime subunit; Nsp18930; ORF_ID:nsp18930.
    
  0.771
NSP_35930
Deacetylase; Nsp35930; ORF_ID:nsp35930.
    
 0.766
NSP_5410
Deacetylase; Nsp5410; ORF_ID:nsp5410.
    
 0.766
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.