STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_30240Very large inducible GTPase-1; Nsp30240; ORF_ID:nsp30240. (2307 aa)    
Predicted Functional Partners:
NSP_7870
Bile acid beta-glucosidase; Nsp7870; ORF_ID:nsp7870.
  
 
 0.925
NSP_3440
Chromosome segregation SMC protein; Nsp3440; ORF_ID:nsp3440.
  
    0.776
NSP_14770
Heme oxygenase; Nsp14770; ORF_ID:nsp14770.
  
     0.762
rpsK
SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
 
  0.758
NSP_14190
Glutathione S-transferase, putative; Nsp14190; ORF_ID:nsp14190.
  
     0.746
NSP_23040
Distant similarity with leukotriene C4 synthase (microsomal glutathione S-transferase); Nsp23040; ORF_ID:nsp23040.
  
     0.746
NSP_35440
Arachidonate 15-lipoxygenase precursor; Nsp35440; ORF_ID:nsp35440.
  
     0.696
NSP_52830
Cytochrome P450; Nsp52830; ORF_ID:nsp52830; Belongs to the cytochrome P450 family.
  
 
  0.665
NSP_23200
Putative fucosyl transferase; Nsp23200; ORF_ID:nsp23200.
  
     0.639
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
 
   0.613
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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