STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_30380Transposase; Nsp30380; ORF_ID:nsp30380. (214 aa)    
Predicted Functional Partners:
NSP_30370
Hypothetical protein; Nsp30370; ORF_ID:nsp30370.
      0.773
NSP_10780
Hypothetical protein; Nsp10780; ORF_ID:nsp10780.
  
     0.464
NSP_13390
HEAT repeat protein; Nsp13390; ORF_ID:nsp13390.
  
     0.451
NSP_30390
Putative hemagglutinin-like protein; Nsp30390; ORF_ID:nsp30390.
       0.432
NSP_11910
TonB-dependent receptor; Nsp11910; ORF_ID:nsp11910; Outer membrane receptor for ferrienterochelin and colicins.
  
     0.421
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.