STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_31230N-terminal acetyltransferase; Nsp31230; ORF_ID:nsp31230. (209 aa)    
Predicted Functional Partners:
NSP_31220
Superfamily I DNA and RNA helicase; Nsp31220; ORF_ID:nsp31220.
 
     0.769
NSP_50560
Bacilysin biosynthesis protein bacB; Nsp50560; ORF_ID:nsp50560.
    
 0.657
NSP_31240
Single-stranded-DNA-specific exonuclease RecJ; Nsp31240; ORF_ID:nsp31240.
       0.487
NSP_14230
Hypothetical protein; Nsp14230; ORF_ID:nsp14230.
  
     0.470
NSP_31210
Hypothetical protein; Nsp31210; ORF_ID:nsp31210.
       0.443
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.435
NSP_35710
DNA segregation ATPase FtsK/SpoIIIE; Nsp35710; ORF_ID:nsp35710.
  
     0.426
NSP_1350
Hypothetical protein; Nsp1350; ORF_ID:nsp1350.
  
     0.425
NSP_27990
Hypothetical protein; Nsp27990; ORF_ID:nsp27990.
  
     0.423
NSP_12830
Anti-sigma F factor antagonist (spoIIAA-2); Nsp12830; ORF_ID:nsp12830.
  
     0.417
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.