Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NSP_32020D-alanyl-D-alanine carboxypeptidase; Nsp32020; ORF_ID:nsp32020. (271 aa)    
Predicted Functional Partners:
NSP_2850
Cell division protein FtsI [Peptidoglycan synthetase]; Nsp2850; ORF_ID:nsp2850.
  
  
 0.868
NSP_1440
D-alanyl-D-alanine carboxypeptidase; Nsp1440; ORF_ID:nsp1440.
     
 0.847
NSP_31910
Cell division protein FtsI [Peptidoglycan synthetase]; Nsp31910; ORF_ID:nsp31910.
     
 0.847
NSP_46060
Multimodular transpeptidase-transglycosylase; Nsp46060; ORF_ID:nsp46060.
     
 0.836
NSP_770
Multimodular transpeptidase-transglycosylase; Nsp770; ORF_ID:nsp770.
     
 0.836
NSP_52290
Multimodular transpeptidase-transglycosylase; Nsp52290; ORF_ID:nsp52290.
     
 0.745
NSP_32030
Transporter; Nsp32030; ORF_ID:nsp32030.
 
     0.663
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
   
 0.468
NSP_29050
D-alanyl-D-alanine carboxypeptidase; Nsp29050; ORF_ID:nsp29050.
     
 0.429
NSP_23940
Phosphinothricin N-acetyltransferase; Nsp23940; ORF_ID:nsp23940.
     
  0.410
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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