Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSP_32080Hypothetical protein; Nsp32080; ORF_ID:nsp32080. (168 aa)    
Predicted Functional Partners:
NSP_4110
Transcriptional regulator AbrB; Nsp4110; ORF_ID:nsp4110.
  
     0.774
NSP_47600
AbrB family transciptional regulator; Nsp47600; ORF_ID:nsp47600.
  
     0.772
NSP_38940
Cyanobacterial hypothetical protein; Nsp38940; ORF_ID:nsp38940.
  
     0.771
NSP_28520
Hypothetical protein; Nsp28520; ORF_ID:nsp28520.
  
     0.770
NSP_32090
Hypothetical protein, contains S4-like RNA binding domain; Nsp32090; ORF_ID:nsp32090.
       0.770
NSP_25300
Hypothetical protein; Nsp25300; ORF_ID:nsp25300.
  
     0.766
NSP_48700
L-lactate permease; Nsp48700; ORF_ID:nsp48700.
  
     0.760
NSP_40280
Low-affinity CO2 hydration protein CphX; Nsp40280; ORF_ID:nsp40280.
  
     0.758
NSP_15230
Putative regulator; Nsp15230; ORF_ID:nsp15230.
  
     0.757
NSP_44270
Hypothetical protein; Nsp44270; ORF_ID:nsp44270.
  
     0.751
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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