Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
NSP_32090Hypothetical protein, contains S4-like RNA binding domain; Nsp32090; ORF_ID:nsp32090. (259 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 protein (PsbB); One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.
    
  0.981
NSP_50800
Fibronectin/fibrinogen-binding protein; Nsp50800; ORF_ID:nsp50800.
  
 
  0.977
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
  
 0.911
NSP_29870
Chromosome segregation ATPase; Nsp29870; ORF_ID:nsp29870.
     
 0.887
NSP_7160
Hypothetical protein; Nsp7160; ORF_ID:nsp7160.
  
  
 0.879
psb28
Photosystem II 13 kDa protein Psb28 (PsbW); Nsp18490; ORF_ID:nsp18490; Belongs to the Psb28 family.
  
  
  0.874
NSP_14310
Photosystem II manganese-stabilizing protein (PsbO); Nsp14310; ORF_ID:nsp14310.
  
  
  0.867
psbZ
Photosystem II protein PsbZ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.
  
  
  0.855
NSP_3760
Hypothetical protein; Nsp3760; ORF_ID:nsp3760.
     
 0.854
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
  
 0.844
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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