STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_32140Hypothetical protein; Nsp32140; ORF_ID:nsp32140. (375 aa)    
Predicted Functional Partners:
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
    
 0.853
NSP_32150
Hypothetical protein; Nsp32150; ORF_ID:nsp32150.
       0.773
NSP_29310
2-methyl-6-phytyl-1,4-benzoquinone cyclase; Nsp29310; ORF_ID:nsp29310.
  
     0.741
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.728
NSP_38340
Hypothetical protein; Nsp38340; ORF_ID:nsp38340.
  
     0.713
NSP_42130
Hypothetical protein; Nsp42130; ORF_ID:nsp42130; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.684
NSP_29790
Anthranilate phosphoribosyltransferase; Nsp29790; ORF_ID:nsp29790.
  
     0.683
NSP_38290
Hypothetical protein; Nsp38290; ORF_ID:nsp38290.
  
     0.678
NSP_46910
Hypothetical protein; Nsp46910; ORF_ID:nsp46910.
  
     0.666
NSP_28100
Hypothetical protein; Nsp28100; ORF_ID:nsp28100.
  
     0.665
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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