STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_32230Type III restriction-modification system methylation subunit; Nsp32230; ORF_ID:nsp32230. (558 aa)    
Predicted Functional Partners:
NSP_30110
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; Nsp30110; ORF_ID:nsp30110.
 
   
 0.732
NSP_25940
DEAD/DEAH box helicase-like protein; Nsp25940; ORF_ID:nsp25940.
  
     0.567
NSP_34530
Helicase domain protein; Nsp34530; ORF_ID:nsp34530.
  
     0.490
NSP_20700
Adenine specific DNA methyltransferase; Nsp20700; ORF_ID:nsp20700.
  
     0.468
NSP_32210
HigA protein (antitoxin to HigB); Nsp32210; ORF_ID:nsp32210.
       0.468
NSP_32220
HigB toxin protein; Nsp32220; ORF_ID:nsp32220.
       0.468
NSP_34500
Helicase domain protein; Nsp34500; ORF_ID:nsp34500.
  
     0.467
NSP_45510
PvuII DNA methyltransferase; Nsp45510; ORF_ID:nsp45510; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.462
NSP_32240
Hypothetical protein; Nsp32240; ORF_ID:nsp32240.
       0.436
NSP_32250
Hypothetical protein; Nsp32250; ORF_ID:nsp32250.
       0.436
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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