STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_32280Putative membrane protein, specific for cyanobacteria; Nsp32280; ORF_ID:nsp32280. (212 aa)    
Predicted Functional Partners:
NSP_48700
L-lactate permease; Nsp48700; ORF_ID:nsp48700.
  
     0.775
NSP_10430
Hypothetical protein; Nsp10430; ORF_ID:nsp10430.
  
     0.774
ndhL
NADH dehydrogenase subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.774
NSP_47600
AbrB family transciptional regulator; Nsp47600; ORF_ID:nsp47600.
  
     0.774
NSP_51620
Hypothetical protein; Nsp51620; ORF_ID:nsp51620.
  
     0.773
NSP_31720
Hypothetical protein; Nsp31720; ORF_ID:nsp31720.
  
     0.772
NSP_14620
Beta-lactamase class A; Nsp14620; ORF_ID:nsp14620.
  
     0.771
NSP_29530
Hypothetical protein; Nsp29530; ORF_ID:nsp29530.
  
     0.770
NSP_52260
Hypothetical protein; Nsp52260; ORF_ID:nsp52260.
  
     0.770
NSP_33460
Hypothetical protein; Nsp33460; ORF_ID:nsp33460.
  
     0.766
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.