STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33230Biliverdin reductase; Nsp33230; ORF_ID:nsp33230. (348 aa)    
Predicted Functional Partners:
NSP_52430
Hypothetical protein; Nsp52430; ORF_ID:nsp52430.
  
 
 0.902
map-2
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
 
   
 0.815
NSP_6050
Pleiotropic regulatory protein; Nsp6050; ORF_ID:nsp6050; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.743
NSP_47370
Aminotransferase; Nsp47370; ORF_ID:nsp47370; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.734
NSP_12120
Oxidoreductase-like protein; Nsp12120; ORF_ID:nsp12120.
  
     0.726
lysS
Lysyl-tRNA synthetase (class II); Nsp10370; ORF_ID:nsp10370; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.717
NSP_14770
Heme oxygenase; Nsp14770; ORF_ID:nsp14770.
  
  
 0.717
NSP_45450
Putative chaperon-like protein Ycf39 for quinone binding in Photosystem II; Nsp45450; ORF_ID:nsp45450.
   
 
  0.715
NSP_7060
Hypothetical protein; Nsp7060; ORF_ID:nsp7060.
   
 
  0.715
NSP_8490
Divinyl protochlorophyllide a 8-vinyl-reductase; Nsp8490; ORF_ID:nsp8490.
   
 
  0.715
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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