STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33420Hypothetical protein; Nsp33420; ORF_ID:nsp33420. (280 aa)    
Predicted Functional Partners:
NSP_33430
Hypothetical protein; Nsp33430; ORF_ID:nsp33430.
       0.794
NSP_39410
Hypothetical protein; Nsp39410; ORF_ID:nsp39410.
  
     0.773
NSP_40550
Hypothetical protein; Nsp40550; ORF_ID:nsp40550.
  
     0.773
NSP_31120
Hypothetical protein; Nsp31120; ORF_ID:nsp31120.
  
     0.772
NSP_4570
Hypothetical protein; Nsp4570; ORF_ID:nsp4570.
  
     0.771
NSP_52140
DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein; Nsp52140; ORF_ID:nsp52140.
  
     0.771
NSP_44990
Hypothetical protein; Nsp44990; ORF_ID:nsp44990.
  
     0.768
NSP_7160
Hypothetical protein; Nsp7160; ORF_ID:nsp7160.
  
     0.768
NSP_35830
Hemolysins and proteins containing CBS domains; Nsp35830; ORF_ID:nsp35830.
  
     0.767
NSP_36680
Hypothetical protein; Nsp36680; ORF_ID:nsp36680.
  
     0.766
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.