STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33470Glycerol dehydrogenase; Nsp33470; ORF_ID:nsp33470. (394 aa)    
Predicted Functional Partners:
NSP_33480
N-succinyl-L,L-diaminopimelate aminotransferase alternative; Nsp33480; ORF_ID:nsp33480.
 
  
 0.832
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
     
 0.778
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
     
 0.775
NSP_46840
Putative oxidoreductase YqhD; Nsp46840; ORF_ID:nsp46840.
  
  
 0.718
NSP_36840
Hypothetical protein; Nsp36840; ORF_ID:nsp36840.
  
  
  0.685
NSP_4980
Carbohydrate kinase, FGGY family; Nsp4980; ORF_ID:nsp4980.
    
 0.674
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Nsp22920; ORF_ID:nsp22920; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.671
NSP_25870
Diacylglycerol kinase; Nsp25870; ORF_ID:nsp25870.
  
  
  0.633
NSP_40690
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
    
 0.613
NSP_10130
Ribulose-5-phosphate 4-epimerase; Nsp10130; ORF_ID:nsp10130.
  
  
 0.513
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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