STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_3350Amine oxidase, flavin-containing; Nsp3350; ORF_ID:nsp3350. (406 aa)    
Predicted Functional Partners:
NSP_3340
Phytoene desaturase, neurosporene or lycopene producing; Nsp3340; ORF_ID:nsp3340.
 
     0.892
NSP_39810
Superfamily II DNA/RNA helicase, SNF2 family; Nsp39810; ORF_ID:nsp39810.
  
     0.551
NSP_34690
Hypothetical protein; Nsp34690; ORF_ID:nsp34690.
  
     0.515
NSP_15020
Hypothetical protein; Nsp15020; ORF_ID:nsp15020.
  
     0.474
NSP_44230
Hypothetical protein; Nsp44230; ORF_ID:nsp44230.
  
     0.470
NSP_23020
D-alanine--D-alanine ligase; Nsp23020; ORF_ID:nsp23020.
  
     0.448
NSP_4620
Sodium/calcium exchanger membrane region; Nsp4620; ORF_ID:nsp4620.
   
    0.422
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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