STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_33610Hypothetical protein; Nsp33610; ORF_ID:nsp33610. (699 aa)    
Predicted Functional Partners:
NSP_25390
Hypothetical protein; Nsp25390; ORF_ID:nsp25390.
  
     0.638
NSP_49480
Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
    
 
 0.630
NSP_30020
Beta-lactamase superfamily protein; Nsp30020; ORF_ID:nsp30020.
  
     0.614
NSP_13220
Trypsin-like serine protease, typically periplasmic, containing C-terminal PDZ domain; Nsp13220; ORF_ID:nsp13220.
  
     0.613
NSP_49400
ABC transporter ATP-binding protein; Nsp49400; ORF_ID:nsp49400.
      
 0.613
secY
Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.590
NSP_7010
Alkaline phosphatase; Nsp7010; ORF_ID:nsp7010.
  
 
 0.571
NSP_33620
fdxN element excision controlling factor protein; Nsp33620; ORF_ID:nsp33620.
       0.559
NSP_33630
fdxN element excision controlling factor protein; Nsp33630; ORF_ID:nsp33630.
       0.559
NSP_17960
ABC transporter; Nsp17960; ORF_ID:nsp17960.
  
     0.510
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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