STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_3370Fatty acid desaturase; Nsp3370; ORF_ID:nsp3370. (263 aa)    
Predicted Functional Partners:
NSP_44730
Phosphatidylcholine desaturase; Nsp44730; ORF_ID:nsp44730.
 
 
 0.634
NSP_42150
Malonyl CoA-acyl carrier protein transacylase; Nsp42150; ORF_ID:nsp42150.
   
 0.607
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
   
 0.560
NSP_26940
Malonyl CoA-acyl carrier protein transacylase; Nsp26940; ORF_ID:nsp26940.
   
 0.555
NSP_42160
Malonyl CoA-acyl carrier protein transacylase; Nsp42160; ORF_ID:nsp42160.
   
 0.555
NSP_26710
Malonyl CoA-acyl carrier protein transacylase; Nsp26710; ORF_ID:nsp26710.
   
 0.522
NSP_3380
Transcriptional regulator, TetR family; Nsp3380; ORF_ID:nsp3380.
       0.510
NSP_46540
Oxidoreductase, short chain dehydrogenase/reductase family; Nsp46540; ORF_ID:nsp46540.
   
 0.433
NSP_42180
Malonyl CoA-acyl carrier protein transacylase; Nsp42180; ORF_ID:nsp42180.
   
 
 0.417
NSP_1190
Putative dehydrogenase; Nsp1190; ORF_ID:nsp1190; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.416
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.